Multiple sequence alignment

Results: 312



#Item
21Computational phylogenetics / Bioinformatics / Biology / Applied mathematics / BLAST / Sequence alignment / SmithWaterman algorithm / Speedup / Parallel computing / Dynamic programming / General-purpose computing on graphics processing units / Multiple sequence alignment

Pairwise Sequence Alignment with Gaps with GPU Thomas C. Carroll Jude-Thaddeus Ojiaku Prudence W.H. Wong

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Source URL: cgi.csc.liv.ac.uk

Language: English - Date: 2015-10-05 11:33:32
22Computational phylogenetics / Bioinformatics / Biology / Dynamic programming / Applied mathematics / Sequence alignment / Gap penalty / Levenshtein distance / Alignment / String searching algorithm / Multiple sequence alignment / NeedlemanWunsch algorithm

CSE 584A Class 15 Jeremy Buhler March 21, 2016 1

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Source URL: classes.engineering.wustl.edu

Language: English - Date: 2016-03-20 22:29:46
23Computational phylogenetics / Phylogenetics / Biology / Maximum parsimony / Phylogenetic tree / Unrooted binary tree / Sequence alignment / Tree alignment / Multiple sequence alignment / Phylogenetic network / Disk-covering method / Supertree

Computational Phylogenetics An introduction to designing methods for phylogeny estimation Tandy Warnow Contents

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Source URL: tandy.cs.illinois.edu

Language: English - Date: 2016-08-21 21:32:55
24Computational phylogenetics / Bioinformatics / Food and drink / Biology / Multiple sequence alignment / Sequence alignment / Pasta / Personal life

Multiple Sequence Alignment PASTA with Michael Nute Austin, TX

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Source URL: tandy.cs.illinois.edu

Language: English - Date: 2016-06-17 14:45:46
25Computational phylogenetics / Bioinformatics / Biology / Gap penalty / NeedlemanWunsch algorithm / SmithWaterman algorithm / Sequence alignment / BLAST / Multiple sequence alignment

CSE 584A Class 16 Jeremy Buhler March 23, 2016 More alignment basics

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Source URL: classes.engineering.wustl.edu

Language: English - Date: 2016-03-23 01:12:39
26Computational phylogenetics / Biology / Plant reproduction / Bioinformatics / Markov models / Plant sexuality / Seed / BLAST / Sequence alignment / Markov chain

Designing Multiple Simultaneous Seeds for DNA Similarity Search Jeremy Buhler Yanni Sun

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Source URL: www.cse.wustl.edu

Language: English - Date: 2004-01-15 18:48:38
27Bioinformatics / Computational phylogenetics / Biology / Multiple sequence alignment / Sequence alignment / Sequence analysis / BLOSUM / Nucleic acid sequence / Protein structure prediction / Phylo / T-Coffee / Genetic algorithm

Genome Informatics 13: 123–Aligning Multiple Protein Sequences by Parallel Hybrid Genetic Algorithm

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Source URL: www.jsbi.org

Language: English - Date: 2002-12-09 05:53:39
28Computational phylogenetics / Bioinformatics / Estimation theory / Biology / Statistics / Statistical theory / Sequence alignment / Multiple sequence alignment / Estimator / BLOSUM / L-estimator / Alignment

Estimating the Accuracy of Multiple Alignments and its Use in Parameter Advising! Dan F. DeBlasio1 , Travis J. Wheeler2 , and John D. Kececioglu1,!! 1 2

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Source URL: facet.cs.arizona.edu

Language: English - Date: 2012-03-14 17:10:15
29Computational phylogenetics / Bioinformatics / Biology / Dynamic programming / Multiple sequence alignment / NeedlemanWunsch algorithm / Gap penalty / Mathematical and theoretical biology / Applied mathematics

CSE 584A Class 25 Jeremy Buhler April 25, 2016 1

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Source URL: classes.engineering.wustl.edu

Language: English - Date: 2016-04-25 15:56:40
30Biology / Genetics / Bioinformatics / Computational phylogenetics / Nucleic acids / Genomics / Evolutionary biology / Sequence alignment / Multiple sequence alignment / Comparative genomics / Conserved sequence / Nucleic acid sequence

Genome Informatics 15(2): 21–Computational Methods for the Analysis of Differential Conservation in Groups of Similar DNA Sequences

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Source URL: www.jsbi.org

Language: English - Date: 2004-12-16 23:36:49
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